Institute of Molecular Genetics of the Czech Academy of Sciences
…for those new to single cell transcriptomics and spatial transcriptomics technology as well as experienced 10x Genomics technology users.
This highly informative series of exclusive scientific sessions will feature keynote presentations by leading researchers, expert panels, and networking opportunities with peers.
The workshop is supported in part by The project National Institute for Cancer Research (Programme EXCELES, ID Project No. LX22NPO5102)—Funded by the European Union—Next Generation EU.
| 08:30 – 09:30 | Registration |
Session 1
| 09:30 – 11:00 | 10X Genomics News Agnieszka Ciesielska, 10X Genomics Exploring the role of hematopoietic stem cells during infection Meritxell Alberich Jorda, Laboratory of Haematooncology, Institute of Molecular Genetics of the Czech Academy of Sciences (IMG) Deciphering fibroblast heterogeneity in developing mammary gland using scRNA sequencing Zuzana Sumbalová Koledová, Laboratory of Tissue Morphogenesis and Cancer, IMG Role of ISL1 transcription factor in the development of pancreatic endocrine lineages Valeria Fabriciová, Laboratory of Molecular Pathogenetics, Institute of Biotechnology of the Czech Academy of Sciences (IBT) |
| 11:00 – 11:30 | 1st coffee break |
Session 2
| 11:30 – 12:50 | Subpopulations of NG2-expressing cells in healthy and ischemic brain Lucie Janecková, Laboratory of Cell and Developmental Biology, IMG Probing the transcriptome at single-sell and spatial levels Lukas Valihrach, Laboratory of Gene Expression, IBT Scdrake: a reproducible and scalable pipeline for scRNA-seq data analysis Jan Kubovciak, Laboratory of Genomics and Bioinformatics, IMG Genetica Technical Support Insight Michaela Tlustá, GeneTiCA s.r.o. |
| 12:30 – 13:30 | Lunch & Quiz submission |
Session 3
| 13:30 – 14:50 | Identification of drug-resistant mantle cell lymphoma subclones at diagnosis using single-cell transcriptomics Dmitrij Kazancev, Institute of Pathological Physiology, 1st Faculty of Medicine, Charles University Endothelial pyrimidine synthesis deficiency promotes tumor growth Hyroššová Petra, Laboratory of Cellular Metabolism, IBT Change of tumor clonal composition during disease course Boris Tichý, Core Facility Genomics, CEITEC Xenium talk Agnieszka Ciesielska, 10X Genomics |
| 15:20 | 10X Genomics Grant program & Quiz winners |
| 15:30 | End of lectures |
| 15:10 – 16:30 | Have a coffee with your expert |
Online registration – https://10xgen.com/1CH
Contact person – Michal Kolář, michal.kolar@img.cas.cz